| LTPDA Toolbox™ | contents | |
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The LTPDA toolbox restrict access of the properties.
The get access is 'public' and thus it is possible to get the values with the dot-command (similar to structures).
For example:The set access is 'protected' and thus it is only possible to assign a value to a property with a set-method.
val = obj.prop(2).prop;
For example: obj2 = obj1.setName('my name') % This command creates a copy of obj1 (obj1 ~= obj2) obj.setName('my name'); % This command applies to obj
| Properties | Description | Defining Class |
|---|---|---|
| dy | standard errors of the parameters. | pest |
| y | input pest objects as - input pest objects array OUTPUTS: val - matrix with 'y', one column for each input object Parameters Description %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | pest |
| names | names of the parameters, if any | pest |
| yunits | the units of each parameter | pest |
| posterior probability distribution of the parameters | pest | |
| cov | covariance matrix of the parameters | pest |
| corr | correlation matrix of the parameters | pest |
| chi2 | reduced chi^2 of the final fit | pest |
| dof | degrees of freedom | pest |
| chain | monte carlo markov chain | pest |
| models | models that were fit | pest |
| hist | history of the object (history object) | ltpda_uoh |
| procinfo | plist with additional information for an object. | ltpda_uoh |
| plotinfo | plotinfo object | ltpda_uoh |
| name | name of the object | ltpda_uo |
| description | description of the object | ltpda_uo |
| UUID | Universally Unique Identifier of 128-bit | ltpda_uo |
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| Methods | Description | Defining Class |
|---|---|---|
| rebuild | Rebuilds the input objects using the history. | ltpda_uoh |
| pest | Constructor for parameter estimates (pest) class. | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| double | Overloads double() function for pest objects. | pest |
| y | Get the data property 'y'. | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| get | Get a property of a object. | ltpda_obj |
| search | Select objects that match the given name. | ltpda_uo |
| setDescription | Sets the 'description' property of a ltpda_uo object. | ltpda_uo |
| setName | Sets the property 'name' of an ltpda_uoh object. | ltpda_uo |
| created | Returns a time object of the last modification. | ltpda_uoh |
| creator | Extract the creator(s) from the history. | ltpda_uoh |
| csvexport | Exports the data of an object to a csv file. | ltpda_uoh |
| index | Index into a 'ltpda_uoh' object array or matrix. This properly captures the history. | ltpda_uoh |
| requirements | Returns a list of LTPDA extension requirements for a given object. | ltpda_uoh |
| setPlotAxes | Sets the 'axes' property of a the object's plotinfo. | ltpda_uoh |
| setPlotColor | Sets the color of a the object's plotinfo. | ltpda_uoh |
| setPlotFigure | Sets the 'figure' property of a the object's plotinfo. | ltpda_uoh |
| setPlotFillmarker | Defines if the plot function fill the marker or not. | ltpda_uoh |
| setPlotLineStyle | Sets the linestyle of a the object's plotinfo. | ltpda_uoh |
| setPlotLinewidth | Sets the linewidth of a the object's plotinfo. | ltpda_uoh |
| setPlotMarker | Sets the marker of a the object's plotinfo. | ltpda_uoh |
| setPlotMarkerEdgeColor | Sets the color of a the object's marker edge. | ltpda_uoh |
| setPlotMarkerFaceColor | Sets the color of a the object's marker face. | ltpda_uoh |
| setPlotMarkersize | Sets the markersize of a the object's plotinfo. | ltpda_uoh |
| setPlotinfo | Sets the 'plotinfo' property of a ltpda_uoh object. | ltpda_uoh |
| setPlottingStyle | Sets the style property of a the object's plotinfo. | ltpda_uoh |
| setProcinfo | Sets the 'procinfo' property of a ltpda_uoh object. | ltpda_uoh |
| setShowsErrors | Sets the 'showErrors' property of a the object's plotinfo. | ltpda_uoh |
| combineExps | Combine the results of different parameter estimation | pest |
| computePdf | Computes Probability Density Function from a pest object | pest |
| find | Creates analysis objects from the selected parameter(s). | pest |
| mcmcPlot | M - Tool to visualise results of a MCMC sampling. | pest |
| setChain | SETCHI2 Set the property 'chain' | pest |
| setChi2 | Set the property 'chi2' | pest |
| setCorr | Set the property 'corr' | pest |
| setCov | Set the property 'cov' | pest |
| setDof | Set the property 'dof' | pest |
| setDy | Set the property 'dy' | pest |
| setDyForParameter | Sets the according dy-error for the specified parameter. | pest |
| setModels | Set the property 'models' | pest |
| setNames | Set the property 'names' | pest |
| setPdf | Set the property 'pdf' | pest |
| setXvals | Sets the 'xvals' property of the underlying smodel object. | pest |
| setY | Set the property 'y' | pest |
| setYforParameter | Sets the according y-value for the specified parameter. | pest |
| setYunits | Set the property 'yunits' | pest |
| setYunitsForParameter | Sets the according y-unit for the specified parameter. | pest |
| simplifyYunits | Simplifies the units of parameters in a pest | pest |
| tdChi2 | Computes the chi-square for a parameter estimate. | pest |
| viewResults | Displays the content of the pest object as an html report. | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| isprop | Tests if the given field is one of the object properties. | ltpda_obj |
| bsubmit | Submits the given collection of objects in binary form to an LTPDA repository | ltpda_uo |
| submit | Submits the given collection of objects to an LTPDA repository | ltpda_uo |
| update | Updates the given object in an LTPDA repository | ltpda_uo |
| string | Writes a command string that can be used to recreate the input object(s). | ltpda_uoh |
| type | Converts the input objects to MATLAB functions. | ltpda_uoh |
| generateConstructorPlist | Generates a PLIST from the properties which can rebuild the object. | pest |
| plot | The pest objects on the given axes. | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| mve | Minimum Volume Ellipsoid estimator | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| save | Overloads save operator for ltpda objects. | ltpda_uo |
| report | Generates an HTML report about the input objects. | ltpda_uoh |
| viewHistory | Displays the history of an object as a dot-view or a MATLAB figure. | ltpda_uoh |
| char | Convert a pest object into a string. | pest |
| display | Overloads display functionality for pest objects. | pest |
| jtable | Display the parameters from PEST objects in a java table. | pest |
| table | Display the parameters from PEST objects in a java table. | pest |
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| Methods | Description | Defining Class |
|---|---|---|
| isequal | Overloads the isequal operator for ltpda objects. | ltpda_obj |
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| Methods | Description | Defining Class |
|---|---|---|
| eval | Evaluate a pest object | pest |
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| |
parfrac Class | plist Class | |
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